Ew I don't even want to begin talking about timeline theories. We could be here all day haha.
From what I see, there are a lot of different ones, hence the word "theory." I guess it depends on what you think and how long you will sit there and logic things out. All I know for sure is Wind Waker is one of the more modern times in the timeline. I haven't played that game for awhile sadly, but wasn't Hyrule drowned away after Link defeated Ganon at some point? This makes me push this game farther down the timeline for sure. But the other games..... I have no clue where to put them.