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Press F11 and you'll be in Script Editor.
Search for Win32API class.
Then, scroll down the script until you find this:
Code:
#==============================================================================
# - proceed with creation of the window
#------------------------------------------------------------------------------
# the width and height variables set the screen size.
#==============================================================================
$width = 240 * 2
$height = 160 * 2
Change $width and $height to values you want (The default one for RMXP is 640 x 480)