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I've found the problem but don't know how to fix, the problem is with FamiliaWerneck's Reusable Pokéballs: https://www.pokecommunity.com/showthread.php?p=8896448#post8896448
I've removed the pointer for his routine then the rod don't disappears, but I want the Reusable Pokéballs. =\
I think this routine removes the last used item before catch a pokémon, but the last item used from the Bag, the Safari Ball isn't on the Bag.