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The EPI just got a new update and it has been behaving weirdly for me too. I just ended up Googling the scripts I wanted and downloading them from pages on Pokécommunity/RelicCastle
Idk where you got this from, given that I haven't actually updated the EPI in like a year.
The error may be related to an `Data/upi.dat` file pre-existing in your project that the EPI is trying to read, but does not reflect the actual status of the stuff you've installed in your project. My suggestion would be to remove all the already installed resources through the EPI (if possible, manually if not) and deleting the `upi.dat`. Then trying to install what you need with the tool.