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Fire Red: charmander (chose charmander in red version)
Leaf Green: bulbasaur (chose bulbasaur in blue version)
ruby: treeko (evolves into my favorite pokemon which is grovyle)
saphire: mudkip (have no clue why)
emerald: don't own
I love the starters in RSE. They all end up being awesome. Swampert is a beast, Sceptile is awesome, and Blaziken is just really fun to use. My next run through will likely be Mudkip.
On Pokemon Ruby, I started out with Treeko, mainly because so I could beat the first Gym. But after seeing the final evolution of Torchic, I restarted and chose that instead. I've restarted a bunch of times after that and now I always chose Treeko. On my Emerald I always choose Mudkip. When I had FireRed, I chose Charmander.
In Blue I chose Venasaur. I chose bulbasaur by accident, actually. But I didn't know how to start new game back then. xD
In Crystal I chose tododile. It's just that Feraligatr has the highest physical attack stat out of all 3 johto starters.
In emerald I chose mudkip. because i LIEK THEM.
in platinum I chose empoleon because I like penguins. xD
in white I chose serperior since it's the fastest.