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Thanks for the feedback. I actually ended up scrapping the ROM those maps were on a few days later, but I was going to use similar maps after planning out my hack a bit more. I'll definitely take everything into consideration once I get back to mapping.
No. 03 scripts can't do things that affect the overworld. They can only set flags and vars and stuff, but nothing that can be seen on screen. You must use the 02 or 04 types to insert regular scripts. There you will need a var and such. See Cooly's level scripting tut for more info.