Hah! I actually fixed that when I first did the route, without even knowing what it was. That said, some legendaries don't seem to be spawning properly for me, and items I KNOW I fixed have respawned again... o-o
Scratch that, I've got everything except Raikou, I just have no IDEA where his alternate spawn point could be... Any tips? Never mind! Silly Raikou *eyeroll*
And I guess you are just going to have to suffer free items now and then, as far as the respawning goes. Since I have no clue why that just happened. XD
Anyway, I'm done for now, all the legendaries are accounted for with no glitches (aside from free items!) that I've noticed. I'll do the World Championship tomorrow, and then hopefully post the patch! :D