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I agree with Wormadan, Huntail, Spoink and Piloted.
I think it maybe depends on which Generation you remember the most, or was most popular...for example, I came late to Hoenn after playing Kanto, Johto and Sinnoh, and I tend to forget a lot of Hoenn Pokémon completely. In fact, I probably couldn't name over 10 Hoenners without getting stuck, because I think of most of them as being Sinnohian. >:
I saw someone do this on Gamefaqs, and he did it as a contest. Start with the numbers 1-493 blank, and each person copies and pastes the chart and adds one more name. Go until there is only one name left, and bingo... you have the most forgotten pokemon. Rules are: You are not allowed to look pokemon up by number to find their name. You CAN look them up by name to find their number though.